Bltools V2.2 «Working»
4.1 Adapter and Quality Trimming (bltrim)
4.2 Streaming Conversion & Interleaving (blfastq2bam)
4.3 Duplicate marking (bldedup)
4.4 BAM Cleanup (blbamclean)
4.5 Base Quality Recalibration (blrecal) bltools v2.2
4.6 Variant Filtering (blfilter)
4.7 Statistics & Reporting (blstats)
BLTools v2.2 is a significant feature release focused on extensibility, performance optimization, and logging fidelity. While labeled a minor version bump, this release introduces the highly requested Plugin Architecture and resolves critical memory leakage issues present in the v2.1 branch. All users currently on v2.1.x are strongly encouraged to upgrade immediately.
A new bltools profile command generates statistical summaries (null counts, cardinality, outliers) of any dataset, helping you understand data quality before transformation. Version 2.2 represents a maturity leap
pip install --upgrade bltools
Before we explore the specifics of version 2.2, let’s establish a baseline. bltools (short for "Business Logic Tools") is an open-source command-line interface (CLI) utility designed to simplify complex data operations. Unlike heavy GUI-based ETL platforms, bltools focuses on:
Version 2.2 represents a maturity leap, addressing community feedback and introducing long-awaited features without sacrificing the tool’s legendary speed. bltools focuses on:
